CODE

You can find R and Unix shell scripts that I wrote for data analyses in my GitHub page, here .

I provide code for my most recent projects. I plan to add code used in older manuscripts progressively.

I list my public GitHub repositories and their content below.

1. Prates et al. 2018 - Ecology and Evolution

This repository contains the following information:

R and Unix shell scripts used to prepare and filter the data and perform all analyses.
R code used to define prior ranges for the parameters of SNAPP and G-PhoCS analyses.
R code used to make plots of population genetic structure from SNMF results.
Genetic and environmental data used in all analyses.
Configuration files used in Ipyrad, SNAPP (.xml) and G-PhoCS (.ctl) analyses.
Results from analyses performed in R using the LEA package (LFMM, SNMF, PCA).
Data used to make maps shown in Fig. 1 of the manuscript.